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About the Programme Academic Staff Program Qualifications Lessons Matrix of Course & Program Qualifications Turkish Qualifications Framework (TQF) TQF & Program Qualifications
  1. Graduate School
  2. Department of Pharmaceutical Chemistry
  3. Master of Science (MSc) in Pharmaceutical Chemistry
  4. Course Structure Diagram with Credits
  5. Molecular Docking and Dynamics Simulation in Medicinal Chemi
  6. Description
  • Description
  • Learning Outcomes
  • ECTS Credit Load
  • Course's Contribution to Program
  • Learning Outcomes & Program Qualifications
Last Updated: 30/09/2026

Code - Course Title Course Type Laboratory + Practice ECTS
FKM534 - Molecular Docking and Dynamics Simulation in Medicinal Chemi II. SEMESTER 3 +0 6.0
Language of Instruction Türkçe
Course Type Elective Courses
Course Instructor(s) DOÇ. DR. BEGÜM NURPELİN SAĞLIK ÖZKAN
Mode of Delivery Face to face learning
Place of Delivery
Used Educational Platforms
Prerequisites There is no prerequisite or co-requisite for this course.
Courses Recomended There is no recommended optional program component for this course.
Recommended Resources There is no recommended or required reading for this course.
Work Placement Work placement is not applicable.
Aims of the Course

Weeks Learning Outcomes Topics Teaching Methods
Week - 1 Introduction to molecular modeling
Week - 2 Molecular modeling approaches
Week - 3 Molecular modeling applications and examples in drug design
Week - 4 Identification and use of programs used in medicinal chemistry
Week - 5 2-Dimensional and 3-dimensional representation of chemical compounds
Week - 6 Studies on protein database and representation of proteins
Week - 7 Preliminary studies for molecular docking
Week - 8 Molecular docking studies
Week - 9 Evaluation of molecular docking studies
Week - 10 Use of molecular dynamics programs in drug development
Week - 11 Preliminary studies for molecular dynamics simulation
Week - 12 Molecular dynamics simulations
Week - 13 Evaluation of molecular dynamics simulations
Week - 14 Applications for molecular docking and dynamics simulation

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Assessment Method and Passing Requirements
Quamtity Percentage (%)
Toplam (%)

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